Archive for the ‘Announcements’ Category
NCBI will assist the University of California Davis in hosting a biomedical data science hackathon June 13-15 at the School of Veterinary Medicine in Davis, CA, focusing on advanced bioinformatics analysis of next generation sequencing data and metadata. This event is for students, postdocs, investigators and other researchers already engaged in the use of pipelines for genomic analyses from next-generation sequencing data or metadata. The event is open to anyone selected for the hackathon, and able to travel to Davis. Working groups of 5-6 individuals will be formed into five or six teams. These teams will build pipelines and tools to analyze large datasets within a cloud infrastructure.
Applications are due by May 5 at 5:00PM EDT. Participants will be selected from a pool of applicants based on the experience and motivation they provide on the form. Prior participants and applicants are especially encouraged to reapply. Applicants must be willing to commit to all three days of the event. No financial support for travel, lodging or meals is available.
Earlier this year, the National Library of Medicine announced its receipt of a generous gift from The DeBakey Medical Foundation to support enhanced access to the Michael E. DeBakey Archives at the NLM and to establish the Michael E. DeBakey Fellowship in the History of Medicine. NLM is now pleased to announce the first call for applications to the Michael E. DeBakey Fellowship in the History of Medicine.
Michael E. DeBakey (1908–2008) was a legendary American surgeon, educator, and medical statesman. During a career spanning 75 years, his work transformed cardiovascular surgery, raised medical education standards, and informed national health care policy. He pioneered dozens of operative procedures such as aneurysm repair, coronary bypass, and endarterectomy, which routinely save thousands of lives each year, and performed some of the first heart transplants. His inventions included the roller pump (a key component of heart-lung machines) as well as artificial hearts and ventricular assist pumps. He was a driving force in building Houston’s Baylor University College of Medicine into a premier medical center, where he trained several generations of top surgeons from all over the world.
The Michael E. DeBakey Fellowship in the History of Medicine will support individuals in pursuing research in NLM’s Michael E. DeBakey papers, related collections held by the NLM, and the vast range of subjects which informed, or were informed by, Michael E. DeBakey’s professional career – from surgery to health care policy, medical libraries and expanding access to medical information, medical technology to medical ethics, military medicine to veteran health, humanitarianism to international diplomacy in the medical arena. Applications are invited from anyone over the age of eighteen, of any academic discipline and status. Non-U.S. citizens may apply.
Fellowships of up to $10,000 will be awarded to individual applicants, not to institutions, to help offset the costs associated with visiting and using the NLM collections, but may not be used for institutional costs or overhead (e.g. clerical costs, supplies, or other attendant project expenses). To receive consideration, all materials must be submitted via the online system, by 5:00pm EDT, September 1, 2016. Awards will be announced by the end of the calendar year.
On March 22 the NLM History of Medicine Division’s image database, Images from the History of Medicine (IHM), launched in Open-iSM, the National Library of Medicine’s open access biomedical image search engine from the Lister Hill National Center for Biomedical Communications (LHNCBC). Open-iSM enables search and retrieval of abstracts and images (including charts, graphs, clinical images, etc.) from open source literature and biomedical image collections. IHM’s nearly 70,000 images now join over 1.6 million images already available through Open-iSM from sources including the open access subset of PMC, a free full-text archive of biomedical and life sciences journal literature at the National Library of Medicine, the Indiana University hospital network, and the Orthopaedic Surgical Anatomy Teaching Collection at the University of Southern California (USC) Digital Library. For additional details, visit NLM’s Circulating Now blog posting.
The Annual Meeting of the Medical Library Association (MLA) will be held May 13-18, 2016, at the Metro Toronto Convention Centre, Toronto, ON, Canada. Attendees are invited to visit the NLM exhibit booth #427 (May 14-17) to meet NLM staff and see NLM Web products and services. The NLM Theater at the booth will feature demonstrations and tutorials on a wide variety of topics. All presentations are recorded and made available on the NLM Web site shortly after the meeting. The NLM Update will be held on Tuesday, May 17, 11:00 – 11:55 am, at the Metro Toronto Convention Centre, Room 105/106/107. It will feature presentations by Betsy Humphreys, Acting Director; Joyce Backus, Associate Director for Library Operations; and Stacey Arnesen, Head, Office of Disaster Information Management Research Center (DIMRC). For a complete NLM Theater Schedule, visit the NLM Technical Bulletin.
The Scholarly Publishing and Academic Resources Coalition (SPARC), in collaboration with Johns Hopkins University (JHU) Libraries, has released a new resource for tracking, comparing, and understanding U.S. federal funder research data sharing policies. This freely available tool provides a detailed analysis of 16 federal agency responses to the directive issued by the White House Office of Science and Technology Policy (OSTP) on Increasing Access to the Results of Federally Funded Research. Specifically, the new resource focuses on how these agencies intend to make the digital data associated with the projects they fund available for access and reuse.
The SPARC/JHU Libraries resource can be used by researchers, librarians, policy makers, and other stakeholders to explore and compare agency plans. The detailed review, performed by JHU data experts, includes an analysis of the principles, scope, and limitations of agency responses to the OSTP directive, as well as a discussion of any goals and plans the agencies have articulated for future iterations of their policies. The resource contains practical information that can be used by active or prospective grant awardees to easily understand where research data can be shared, how quickly, and what other procedures must be followed to ensure grant compliance. It will be updated as additional federal agency plans are released and analyzed, and as current plans are revised. The entire dataset of policy analyses can be downloaded without restriction from the site.
The Annual NLM/MLA Joseph Leiter Memorial Lecture will be held this year on Wednesday, May 4, at 1:00pm ET (10:00am PDT) in the Lister Hill Auditorium at the National Library of Medicine in Bethesda, MD. The two-hour lecture was videocast and archived by NIH. In line with the traditional Leiter Lecture theme of fostering biomedical communication, this year’s lecturer is Jonna Mazet, DVM, MPVM, PhD, who will give the presentation Emerging Infectious Diseases in the 21st Century: A Prevention paradigm for surveillance, information sharing, & health diplomacy. Dr. Mazet is professor of epidemiology and disease ecology, and executive director of the One Health Institute, at the UC Davis School of Veterinary Medicine, where she focuses on global health problem solving, especially for emerging infectious disease and conservation challenges. Currently, she is Principal Investigator for “PREDICT – Wildlife SMART Surveillance for Zoonotic Diseases of Pandemic Potential,” a part of US Agency for International Development. Her specialty is studying diseases that could jump from an animal host population to a human population, such as SARS and Ebola. She will talk about the project and how to disseminate information to relevant agencies and groups to help prevent or minimize pandemic disease from such sources.
This month, the National Library of Medicine’s Disaster Lit database added its 10,000th record on the clinical and public health aspects of natural disasters, human-caused disasters, terrorism, disease outbreaks, and other public health emergencies. Disaster Lit describes and links to reports, webinars, training, conferences, factsheets and other documents that are not commercially published. Disaster Lit complements the journal literature in PubMed and the resources for the public in MedlinePlus. Materials are carefully selected by NLM medical librarians and subject experts from nearly 1,000 approved sources and provide current awareness for health professionals, first responders and emergency planners who have disaster health responsibilities.
New content is sent daily to nearly 14,000 subscribers via RSS, Twitter, email subscriptions, and the DISASTR-OUTREACH-LIB listserv. Disaster Lit plays a key role in collecting the earliest available trusted medical guidance soon after a disaster event or disease outbreak, often long before the same guidance can be published in peer-reviewed medical journals.
Disaster Lit supports other federal disaster information programs by providing the:
The Disaster Lit collection of grey literature was started in 2002 by the New York Academy of Medicine, with funding from the National Library of Medicine (NLM) National Information Center for Health Services Research (NICHSR). In 2010, the database moved to the then-new Disaster Information Management Research Center, Specialized Information Services (SIS) Division, NLM. The database continues to grow with funding support from SIS, NICHSR and the National Institute of Environmental Health Sciences.
Questions or comments may be sent to the Disaster Information Management Research Center.
On April 1 the US Department of Health and Human Services (HHS) Office of Minority Health (OMH) launched the annual observance of National Minority Health Month. The theme this year, Accelerating Health Equity for the Nation, will promote the extraordinary efforts underway by HHS and the Obama Administration to reduce disparities, advance equity, and strengthen the health and well-being of all Americans. The OMH invites everyone across the nation to join together to raise awareness of the health disparities that continue to affect racial and ethnic minorities and to work together to accelerate health equity.
The observance of the 30th anniversary of the HHS Office of Minority Health will also begin during National Minority Health Month. Since its establishment in 1986, the OMH has served as the HHS lead agency for improving the health of racial and ethnic minority populations through the development of health policies and programs to help eliminate health disparities. On April 7 there will be a live broadcast of the HHS Equity Forum at 10:30 am PDT. Join OMH for the HHS Health Equity Forum webcast in observance of National Minority Health Month and the 30th anniversary of the HHS Office of Minority Health!
The Office of Disease Prevention and Health Promotion (ODPHP) is seeking membership nominations for the Secretary’s Advisory Committee on National Health Promotion and Disease Prevention Objectives for 2030. They are looking for a diverse group of nationally known experts in fields related to disease prevention and health promotion to help develop the vision, framework, and structure of Healthy People 2030. Nominations must be submitted by April 18. For more information on the nomination process, visit the Federal Register notice.
The Committee of Medical Journal Editors (ICMJE) is seeking feedback on proposed requirements for sharing clinical trial data from any interested stakeholder, including clinical trial participants, librarians, patients, editors, and researchers. Read the editorial published in Annals of Internal Medicine, “Sharing Clinical Trial Data: A Proposal from the International Committee of Medical Journal Editors” and submit your comments by April 18! You can also check out previously posted comments. Submitted comments will be posted within one business day.