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Archive for the ‘Informatics’ Category

Free Webinar: Bioinformatics Librarianship. Get to Know It!

Monday, December 26th, 2016

A growing number of librarians are filling a special niche in the information world: Serving those who work with genetic and molecular biology information.  In this one-hour webinar, meet eight of your colleagues as they explain their specialized and uniquely valuable roles at their institution.

  • Julie A Arendt, Virginia Commonwealth University
  • Marci Brandenburg, University of Michigan
  • Rolando Garcia-Milian, Yale University
  • Karen H Gau, Virginia Commonwealth University
  • Tobin Magle, Colorado State
  • Robyn Reed, Penn State University
  • Elliott Smith, University of California, Berkeley
  • Wright, Johns Hopkins Medicine

Title: What is Bioinformatics Librarianship?

Date: Thursday, January 12, 2017

Time: 1pm ET/12pm CT/11am MT/10am PT (1 hour webinar)

Registration required: https://nnlm.gov/class/what-bioinformatics-librarianship/6666

Moderated by: Peter Cooper, NCBI & Kate Majewski, NLM

Hosted by: NTO and the Bioinformatics Education Working Group

Send in Your Application to Participate in “A Librarian’s Guide to NCBI” Bioinformatics Course

Monday, September 29th, 2014

Health science librarians in the United States are invited to participate in the next offering of the bioinformatics training course, “A Librarian’s Guide to NCBI,” sponsored by the National Library of Medicine (NLM), the National Center for Biotechnology Information (NCBI), and the National Network of Libraries of Medicine, NLM Training Center (NTC).

The course provides knowledge and skills for librarians interested in helping patrons use online molecular databases and tools from the NCBI. Prior knowledge of molecular biology and genetics is not required. Participating in the Librarian’s Guide course will improve your ability to initiate or extend bioinformatics services at your institution.

Instructors will be NCBI staff and Diane Rein, Ph.D., MLS, Bioinformatics and Molecular Biology Liaison from the Health Science Library, University at Buffalo.

Online Pre-Course and In-Person Course Components
There are two parts to “A Librarian’s Guide to NCBI,” listed below. Applicants must complete both parts. Participants must complete the pre-course with full CE credit (Part 1) in order to advance to attend the 5-day in-person course (Part 2).

  • Part 1: “Fundamentals in Bioinformatics and Searching,” an online (asynchronous) course,
    January 12-February 13, 2015

The major goal of this part is to provide an introduction to bioinformatics theory and practice in support of developing and implementing library-based bioinformatics products and services. This material is essential for decision-making and implementation of these programs, particularly instructional and reference services. The course encompasses visualizing bioinformatics end-user practice. It places a strong emphasis on hands-on acquisition of NCBI search competencies, and developing a working molecular biology vocabulary through self-paced hands-on exercises.

  • Part 2: A 5-day in-person course offered on-site at the National Library of Medicine in Bethesda, Maryland, March 9-13, 2015.

The in-person course will focus on using the BLAST sequence similarity search and Entrez text search systems to find relevant molecular data. The course will describe the various kinds of molecular data available and explain how these are generated and used in modern biomedical research. The course will be a combination of instruction, demonstration, discussions, and hands-one exercises (both individual and group).

Who can apply?

  • Applications are open to health science librarians in the United States.
  • Applicants will be accepted both from libraries currently providing bioinformatics services as well as from those desiring to implement services.
  • Enrollment is limited 25 participants.

What does it cost?

  • There is no charge for the classes. Travel and lodging costs for the in-person class are at the expense of the participant.

Important Application Dates

  • Application deadline: November 17, 2014
  • Acceptance notification: On or about December 15, 2014

How to Apply

  1. Please fill out the Application Form at https://www.surveymonkey.com/s/guide_2015_app.
  2. Once you complete the Application Form, you will be directed to download the Supervisor Support Statement (ftp://ftp.ncbi.nih.gov/pub/education/librarian_guide/Forms/Supervisor_Supportv2.pdf). This is to be filled out and signed by your immediate supervisor. This statement describes your current and/or future role in bioinformatics support at your institution and confirms your availability to attend the course if selected.
  3. Provide your current curriculum vitae (CV). Please use the suggested CV model as a guideline for the type of information desired (ftp://ftp.ncbi.nih.gov/pub/education/librarian_guide/Forms/LibGuide_CV_model.pdf).

Course Page
The course page with additional information is at: http://www.ncbi.nlm.nih.gov/education/librarian/

Questions?
Please direct any questions to: ncbi_course@lists.utah.edu

Save the Dates: 2015 “A Librarian’s Guide to NCBI” Course

Thursday, July 10th, 2014
“This course was a great idea and very well executed! I learned a lot and am much more confident going back to my institution and teaching these resources as well as starting an information service. It’ll take time to become proficient but this was a great start!”
“The singularly most useful and interesting class I’ve taken in years.”
               — Comments from recent class participants

Attention health science librarians in the United States who wish to initiate and/or extend bioinformatics services at your institution! The National Center for Biotechnology Information (NCBI) and the NLM Training Center (NTC) will be offering “A Librarian’s Guide to NCBI” course in 2015. Participants who complete the class will be eligible for Medical Library Association (MLA) Continuing Education credits. The course is free, but travel costs are at the expense of the participant.

There are two parts to the course, and applicants must take both parts:

  • Part 1: “Fundamentals in Bioinformatics and Searching” is a six-week, online (asynchronous) pre-course.
  • Part 2: A five-day in-person course offered on-site at the National Library of Medicine in Bethesda, Maryland.

Important Dates:
Monday, September 29, 2014 – Watch for a detailed announcement about the course and application process here in the NLM Technical Bulletin.
Monday, November 17, 2014 – Application deadline
Monday, December 15, 2014 – Acceptance notifications e-mailed
Monday, January 12, 2015 – “Fundamentals in Bioinformatics and Searching” pre-course begins
Monday, March 9, 2015 – “A Librarian’s Guide to NCBI” five-day in-person class begins at NLM

Mark your calendars for this training opportunity.

Questions?  E-mail ntc@utah.edu.

NCBI turns 25!

Wednesday, November 6th, 2013

On November 4, 1988 Congress established the National Center for Biotechnology Information (NCBI) to develop new information technologies to aid in the understanding of the molecular processes that control health and disease. Since then, the number of tools and databases at NCBI has grown enormously. It can be difficult to keep track of which database does what, so NCBI provides a handy overview of selected NCBI databases. You can download the printable factsheet with short descriptions of each resource or database.

If you’d like to learn more about NCBI resources, check out their Educational Resources page and YouTube videos.  They have a wealth of resources, but you don’t have to learn them all at once! Maybe you’d like to challenge yourself to take 30 minutes a week to discover and explore one of their resources. You can learn a lot in just a few minutes. For example, the short video below describes how to locate all of the genetic sequences of an organism.

Send in Your Application to Participate in a New Bioinformatics Training Course: “A Librarian’s Guide to NCBI”

Thursday, December 13th, 2012

In sponsored partnership, the National Center for Biotechnology Information (NCBI) and the National Network of Libraries of Medicine (NN/LM) National Library of Medicine Training Center (NTC), are pleased to invite participation of health sciences librarians in a new bioinformatics training course: “A Librarian’s Guide to NCBI.” Instructors will be NCBI staff and Diane Rein, Ph.D., MLS, Bioinformatics and Molecular Biology Liaison from the Health Science Library, University at Buffalo.

The course provides basic knowledge and skills for librarians interested in helping patrons use online molecular databases and tools from the NCBI. Attending this course will improve your ability to initiate bioinformatics services at your institution and/or extend current initiatives. Prior knowledge of molecular biology and genetics is not required. Participants who complete the class will be eligible for MLA Continuing Education credits. The course is free but travel costs are at the expense of the participant.

For more information and a link to the application, visit the Technical Bulletin article dated December 13, 2012 here:
http://www.nlm.nih.gov/pubs/techbull/nd12/nd12_training_ncbi_application.html