Archive for the ‘PubMed’ Category
Monday, June 8th, 2015
There is now a new, easy way to generate Venn diagrams based on a PubMed search. Called “PubVenn“, it is an experimental project of Ed Sperr, M.L.I.S. The description is:
“PubVenn takes a complex PubMed search and divides it into its constituent parts. It then searches those disparate parts and shows the piles of citations they return using a proportionally-sized venn diagram.”
Users also report you can search multiple authors to see a visualization of their co-authorship collaborations.
Take some time to explore this interesting tool and see what Venn diagrams result for your search terms.
Friday, May 29th, 2015
|Would you like to gain new search skills and brush up on existing PubMed skills? Then join the National Library of Medicine Training Center for PubMed for Trainers in Dallas. PubMed for Trainers offers an in-depth behind the scenes look at PubMed. You will:
- Fill any gaps in general knowledge you might have about MEDLINE and PubMed
- Enhance your knowledge of the MEDLINE database
- Identify what the National Library of Medicine considers good background information
- Improve your PubMed search technique
- Improve your ability to analyze and implement Medical Subject Headings (MeSH)
- Employ the features and functions of PubMed for use in searching and training
- Experience peer collaboration and learning
What is the format of PubMed for Trainers?
PubMed for Trainers is a 4-part series of classes; 3 online plus 1 in-person class.
When is PubMed for Trainers?
The series of classes is scheduled for the following dates (attendance in all sessions is required):
Session One (online): March 3, 2016 10am-11:30am ET; optional 30 minute instructional design component immediately after PubMed content
Session Two (online): March 10, 2016 10am–11:30am ET; optional 30 minute instructional design component immediately after PubMed content
Session Three (online): March 17, 2016 10am–11:30am ET; optional 30 minute instructional design component immediately after PubMed content
Session Four (in-person): March 24, 2016 9:00am–4:30PM ET (This class will be held at UT Southwestern Medical Center at Dallas Library).
What should I expect from the class?
The classes consist of lectures, individual exercises, group work and discussions, plus approximately 2-3 hours of independent homework.
How many MLA CE Credits will I get?
When you complete the PubMed portion of the class, you will receive 13 MLA CE credit hours.
If you also complete the optional instructional design module, you will receive an additional 3 MLA CE credit hours.
For a complete description, go to: http://nnlm.gov/ntcc/classes/class_details.html?class_id=359
To register, visit: https://nnlm.gov/ntcc/classes/register.html?schedule_id=3415
Tuesday, February 10th, 2015
This class is now filled. 24 of 24 seats have been taken.
Would you like to gain new search skills, brush up on existing PubMed skills and collaborate with colleagues to develop training strategies? Space is still available as of February 10! Join the National Library of Medicine Training Center for PubMed for Trainers.
PubMed for Trainers offers an in-depth look at PubMed and provides an opportunity to share training ideas with fellow participants. PubMed for Trainers is a 4-part series of classes; 3 online and 1 in-person class (at the Texas Medical Center Library Classroom, Houston, TX.
The series of classes is scheduled for the following dates (attendance in all sessions is required):
Part One (online): March 5, 2015 10am-12pm CT
Part Two (online): March 12, 2015 10am – 12pm CT
Part Three (online): March 19, 2015 10am – 12pm CT
Part Four (in-person): March 26, 2015 9:00am – 4:30PM CT This class will be held at The Texas Medical Center Library
The classes consist of lectures, individual exercises, group work and discussions, plus approximately 2-3 hours of independent homework. The series is eligible for 15 hours of MLA CE credit.
For a complete description including times, go to: http://nnlm.gov/ntcc/classes/class_details.html?class_id=359
To register, visit http://nnlm.gov/ntcc/classes/register.html?schedule_id=2887
Friday, August 15th, 2014
The National Institutes of Health (NIH) and the National Network of Libraries of Medicine, Southeastern/Atlantic Region will host two free Webinars on the NIH Public Access Policy and the role of libraries.
The NIH Public Access Policy – Information for Librarians
Date: Tuesday, August 19, 2014
Time: 1:00 PM – 2:30 PM EDT
Dr. Neil Thakur, National Institutes of Health
Kathryn Funk, National Library of Medicine
We will discuss the following topics:
- Review basics of the public access policy, and the role of librarians;
- Present the Public Access Compliance Monitor;
- Answer questions about the policy sent to us in advance via the online registration form;
- Address issues and questions raised during the Webinar.
Register at https://www3.gotomeeting.com/register/269124766. Space is limited, so reserve your seat now!
After registering you will receive a confirmation email containing information about joining the Webinar.
The NIH Public Access Policy – Views from the Library Trenches
Date: Tuesday, August 26, 2014
Time: 3:00 PM – 4:30 PM EDT
Emily Mazure, Duke University Medical Center Library
Susan Steelman and Jessie Casella, University of Arkansas for Medical Sciences Library
Scott Lapinski, Harvard University, Countway Library of Medicine
You have heard the specifics of the NIH Policy. Now find out how librarians are responding to the need to get researchers up to speed on compliance with the policy. Join us to find out the following:
- What strategies librarians are using to support their communities. What’s worked; and what hasn’t;
- How to get started, and which groups to work with at your institution;
- What tools librarians can use to help researchers and improve compliance rates;
- How librarians can work with each other to improve outcomes.
This Webinar will feature presentations from three libraries with experience on the ground helping researchers with the NIH Public Access Policy, followed by a Q&A with the audience. The presenters will discuss their unique approaches in the trenches of supporting and providing outreach on the policy.
Join this Webinar at https://webmeeting.nih.gov/npap
Participation limited to 125 connections, so please consider group viewing.
For telephone audio, dial 1-800-605-5167, and enter participant code: 816440
Wednesday, August 13th, 2014
Update: August 14: 9:30AM all NLM systems were restored.
Beginning at 6:00PM, ET, Wednesday, August 13, 2014, the National Library of Medicine will begin a systems shutdown to allow for the emergency repair of the chilled water supply to the NLM Data Center. These systems may be restored as early as 8:00 AM ET Thursday, August 14, 2014, but possibly as late as 11:00 AM.
Most of the databases and systems on the NLM network are expected to be impacted.
Please check the NLM website for updates.
Monday, August 11th, 2014
Would you like to gain new search skills, brush up on existing PubMed skills and collaborate with colleagues to develop training strategies? Join the National Library of Medicine Training Center for PubMed for Trainers in March 2015.
PubMed for Trainers offers an in-depth look at PubMed and provides an opportunity to share training ideas with fellow participants.
PubMed for Trainers is a 4-part series of classes; 3 online and 1 in-person class (at The Texas Medical Center Library, Houston, TX http://nnlm.gov/scr/about/welcome.html) (more…)
Tuesday, July 29th, 2014
The National Center for Biotechnology (NCBI) has recently announced changes to PubMed Commons. PubMed Commons is a pilot commenting system for authors in PubMed. PubMed is the U.S. National Library of Medicine’s database of the biomedical literature. PubMed Commons enables authors to share opinions and information about scientific publications in PubMed. All authors of publications in PubMed are eligible to become members.
Members play a pivotal role in ensuring that PubMed Commons remains a forum for open constructive criticism and discussion of scientific issues. They can comment on any publication in PubMed, rate the helpfulness of comments, and invite other eligible authors to join.
Among the changes are modifications to streamline the homepage. Information about joining and using PubMed Commons has been consolidated in a single page to help you get started. There will be synopsis of the most recent blog post at the top of the homepage to help you stay up-to-date on PubMed Commons.
For several months, comment rating has given members the chance to weigh in on what comments they find useful. Visitors to PubMed can see these ratings alongside comments. Ratings are a key element in calculating the comment and commenter scores that determine the appearance of comments in the “Selected comments” stream on our homepage.
Some new site modifications will highlight contributions to PubMed Commons. On homepage, “Top comments now” will feature the top three recent comments. On PubMed records, “Selected comments” (from the homepage stream) prompt the appearance of an icon above abstracts, directing readers to comments below.
In response to community feedback, corresponding authors of comments on their publications are being contacted to invite them to join PubMed Commons. This new procedure has resulted in an increase in author responses.
More information is available on the PubMed Commons Blog.
Friday, June 6th, 2014
Every year at the MLA Annual Meeting, the National Library of Medicine holds a variety of presentations in their exhibit booth to bring users up-to-date on NLM databases and services. The recordings of the 13 presentations are now available from the NLM Technical Bulletin. Learn about:
- The ACA, Hospital Community Benefit and Needs Assessment: NLM Resources
- Beau-TOX: TOXNET Gets a Facelift
- MedlinePlus: Usability, Mobile & Responsive Design
- Modernizing History: The New (and much improved) IndexCat Interface
- My NCBI Update: SciENcv & NIH Public Access
- NLM Resources & Electronic Health Records: MedlinePlusConnect, RxNorm & UMLS
- NLM Resources Used in Disasters
- PubMed Commons
- PubMed Health
- PubMed Update
- RDA One Year Later
- Still Scanning After All These Years: New Digital Projects from HMD
- Using the ClinicalTrials.gov Results Database
Monday, November 11th, 2013
A new publication model (PubModel) called Electronic-eCollection was recently introduced for PubMed citations from electronic-only journals. The PubModel value is carried in the journal citation and is used for the citation display in PubMed. The new value Electronic-eCollection means an article is published electronically on a specific date (this date must include year, month, and day in numerical format) and then is also associated with an electronic collection date (akin to an issue; this date can be a year or a year and month, but never a year, month, and day).
Monday, November 4th, 2013
Join us November 20, 2013 for the monthly SCR CONNECTions webinar.
Wednesday, November 20, 2013 from 10:30 – 11:30 am (CT)
Presenters: Trainers from the National Library of Medicine Training Center (NTC) and the U.S. National Library of Medicine (NLM)
Topic: PubMed Update
Join National Training Center and National Library of Medicine trainers for a one-hour PubMed update session. Learn about recently added PubMed features and interface changes from the last six months. Bring your questions!
How to Log In
Go to https://webmeeting.nih.gov/scr/, on the log in screen, choose “Enter as a Guest” and type in your name.
Once the room is open the system will be able to call you to connect to the audio. If this system does not work for you, a call-in number will be provided in the room.
Use *6 to mute or unmute your phone.
**Do Not Place Call on Hold**
Problems? Contact the Regional Medical Library (RML) office at 713-799-7880, or 800-338-7657 (AR, LA, NM, OK, TX only).
This webinar will be available for 1 hour of Medical Library Association (MLA) Continuing Education credit and will be archived for future viewing.