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Archive for the ‘NLM Announcements’ Category

Changes to PubMed Commons

Tuesday, July 29th, 2014

PubMed Commons

The National Center for Biotechnology (NCBI) has recently announced changes to PubMed Commons. PubMed Commons is a pilot commenting system for authors in PubMed. PubMed is the U.S. National Library of Medicine’s database of the biomedical literature.PubMed Commons enables authors to share opinions and information about scientific publications in PubMed. All authors of publications in PubMed are eligible to become members.

Members play a pivotal role in ensuring that PubMed Commons remains a forum for open constructive criticism and discussion of scientific issues. They can comment on any publication in PubMed, rate the helpfulness of comments, and invite other eligible authors to join.

Among the changes are modifications to streamline the homepage.  Information about joining and using PubMed Commons has been consolidated in a single page to help you get started.  There will be synopsis of the most recent blog post at the top of the homepage to help you stay up-to-date on PubMed Commons.

For several months, comment rating has given members the chance to weigh in on what comments they find useful. Visitors to PubMed can see these ratings alongside comments. Ratings are a key element in calculating the comment and commenter scores that determine the appearance of comments in the “Selected comments” stream on our homepage.

Some new site modifications will highlight contributions to PubMed Commons. On homepage, “Top comments now” will feature the top three recent comments. On PubMed records, “Selected comments” (from the homepage stream) prompt the appearance of an icon above abstracts, directing readers to comments below.

In response to community feedback, corresponding authors of comments on their publications are being contacted to invite them to join PubMed Commons.  This new procedure has resulted in an increase in author responses.

More information is available on the PubMed Commons Blog.

Online Discovering TOXNET Class Open for Registration

Thursday, July 17th, 2014

TOXNET

The National Library of Medicine Training Center (NTC) is offering an online, asynchronous class called “Discovering TOXNET” from October 20 – November 14, 2014.

Discover TOXNET and other NLM environmental health databases through videos, guided tutorials, and discovery exercises. The class is taught online in thirteen independent modules.

TOXNET is a web-based system of databases covering hazardous chemicals, environmental health, toxic releases, chemical nomenclature, poisoning, risk assessment and regulations, and occupational safety and health. The independent modules cover TOXLINE, ChemIDplus, TRI, TOXMAP, Hazardous Substances Data Bank, IRIS, Haz-Map, LactMed, WISER, CHEMM, REMM, LiverTox, and more. You’ll learn about the resources through videos, guided tutorials, and discovery exercises.

Who should take the class?
Health sciences librarians and health or environmental sciences professionals interested in unlocking the information in TOXNET and the other environmental health and toxicology resources.

How much time?
You will work on your own time over a period of 4 weeks to complete the modules that are of interest to you. There is one required module; the remaining modules are optional. This class is offered for variable MLA Continuing Education credit. Each module will be offered for 0.5 to 2.0 credit hours, for a total of up to 12 hours. Credit will not be awarded for partial completion of a module. Total credit awarded will be based on completed modules with a minimum of 1.0 credit hours.

What happens during the class?
This course is offered asynchronously through Moodle; you will work at your own pace. Each module consists of guided interactive online tutorials AND/OR tutorial videos as well as discovery exercises. Instructors will be available to answer questions and provide assistance throughout the course.

The modules are:

  1. Introduction to TOXNET: 0.5 hour (Required)
  2. TOXLINE: 1.0 hour
  3. ChemIDplus: 2.0 hours
  4. Integrated Risk Information System & Risk Assessment: 1.0 hour
  5. Hazardous Substances Databank: 1.5 hours
  6. Toxic Release Inventory: 1.0 hour
  7. TOXMAP: 1.5 hours
  8. Household Products Database: 0.5 hour
  9. LactMed: 0.5 hour
  10. Haz-Map: 0.5 hour
  11. WISER & CHEMM: 1.0 hour
  12. REMM: 0.5 hour
  13. LiverTox: 0.5 hour

 
How do I register?
Space in the class are limited, so register today!

For questions, contact the NTC

NLM Invites Nominations for IHTSDO Committees

Wednesday, July 16th, 2014

IHTSDO logo

Call for Nominations: As the U.S. Member of the International Health Terminology Standards Development Organisation (IHTSDO), the National Library of Medicine (NLM) is soliciting nominations of potential candidates for the four IHTSDO Standing Committees – Content, Quality Assurance, Implementation & Education (formerly Implementation and Innovation), and Technical. These Committees have important roles in the ongoing development of the SNOMED CT clinical terminology and in the IHTSDO. Nominations are due to NLM by COB August 4, 2014.

The current roster, terms of reference, and recent reports of each Committee are available on the IHTSDO website.  The Committees are described in Sections 9.4-9.5 of the Articles of the IHTSDO.

Roughly half of each Standing Committee’s 12 members are serving terms that expire in December 2014. People elected to these slots will serve for 2 years (Jan. 2015-Dec. 2016). There may be additional Committee vacancies caused by resignations; people elected to fill these mid-term slots will serve for 1 year (Jan-Dec. 2015).

Current Committee members whose terms are expiring are eligible for re-nomination to the same committee provided they have not served more than six consecutive years on that committee.  Re-nomination to the same committee is possible after sitting out a minimum of one year from the date they left the Committee.  There is no impediment to a Committee member leaving one Committee and being nominated to another.  Current Committee members eligible for re-nomination must submit a nomination package (see details below).

U.S. Nomination Process: All U.S. SNOMED CT Affiliate Licensees (aka, all U.S. UMLS Licensees) may vote to select the U.S. candidates for IHTSDO Committees. The timeline for nominations and elections is:

  • July 15 – August 4: NLM accepts nominations of potential candidates for the four IHTSDO Standing Committees. Only candidates with complete nomination packets will be accepted (see below for details and required forms).
  • August 6 – August 25: U.S. SNOMED CT Affiliates cast votes for their top three candidates for each Standing Committee. Instructions for casting ballots will be sent to U.S. SNOMED CT Affiliates on August 5th. For each Committee, the three candidates receiving the highest number of votes will become the U.S. nominees for the Committee.
  • September 1, 2014: NLM will submit the names of the three (3) candidates receiving the highest number of votes as nominees for each of the four Committees to the IHTSDO for consideration by the IHTSDO General Assembly.
  • October 26-29, 2014: IHTSDO will announce the final results of the election process during the General Assembly Meeting to be held in conjunction with the IHTSDO Community of Practice Meeting.

Committee Obligations and Participation Logistics: English is the official language of the IHTSDO, but Committee Members must be willing to take extra steps to ensure understanding by those for whom English is a second language. Teleconference arrangements are available for all Committee meetings, but, given the geographic distribution of IHTSDO members (currently 27 Members from all corners of the globe), meeting schedules cannot be convenient for all relevant time zones. The IHTSDO encourages Committee Members to attend at least one of the two major IHTSDO meetings each year in person. Committee Members must participate (either in person or via teleconference) in at least 50% of their Committee’s meetings to retain their seat on the Committee. U.S. Committee members may also be called upon to provide advice and input to NLM on matters related to the IHTSDO and SNOMED CT.

Submitting your nomination: Nominations are due to NLM by COB August 4, 2014. Please submit your nomination packets to NLM by e-mail with the subject line “US Nominations – IHTSDO Standing Committees”. NOTE: Nominations MUST be for a specific Committee.

2015 A Librarian’s Guide to NCBI Course

Monday, July 14th, 2014

NCBI logo

Attention health science librarians in the United States who wish to initiate and/or extend bioinformatics services at your institution! The National Center for Biotechnology Information (NCBI) and the NLM Training Center (NTC) will be offering “A Librarian’s Guide to NCBI” course in 2015. Participants who complete the class will be eligible for Medical Library Association (MLA) Continuing Education credits. The course is free, but travel costs are at the expense of the participant.

There are two parts to the course, and applicants must take both parts:

Part 1: “Fundamentals in Bioinformatics and Searching” is a six-week, online (asynchronous) pre-course.
Part 2: A five-day in-person course offered on-site at the National Library of Medicine in Bethesda, Maryland.

Important Dates:
Monday, September 29, 2014 – Watch for a detailed announcement about the course and application process here in the NLM Technical Bulletin.
Monday, November 17, 2014 – Application deadline
Monday, December 15, 2014 – Acceptance notifications e-mailed
Monday, January 12, 2015 – “Fundamentals in Bioinformatics and Searching” pre-course begins
Monday, March 9, 2015 – “A Librarian’s Guide to NCBI” five-day in-person class begins at NLM

More information, including registration specifics, will be coming soon.

Discarding Journals? Check with NLM first

Wednesday, July 2nd, 2014

Hand reaching for bound journal on a shelf

Are you weeding your collection?  Don’t immediately throw the journals away.   Check with NLM to see if they need missing journals.

NLM’s Journal Donation System makes it possible for libraries to determine whether NLM needs any volumes of the print journals they plan to discard.  The system can be used by DOCLINE and non-DOCLINE libraries to offer any title, including titles not owned by NLM.   The system can be accessed at http://www.nlm.nih.gov/journaldonation/ or by searching “Journal Donation System” on NLM’s home page.   In the system, click on “Help” for detailed instructions.  For additional assistance, contact NLM at (301) 496-0081 or NLMJournalDonation@mail.nlm.nih.gov .   NLM will pay shipping for volumes we need. To donate pre-1871 journal volumes to the History of Medicine Division, see http://www.nlm.nih.gov/hmd/about/donate.html.

Since the beginning of the online donation system in April 2009, over 10,000 gifts have been added to the collection.  With the help of libraries planning to discard journal volumes, NLM can build on the success achieved to date.

 

New TOXNET SCR CONNECtions webinar recording now available

Friday, June 20th, 2014

toxnet

TOXNET has had a complete redesign. What are the changes?  Where are your favorite databases?  Can you still search all databases at once?

On the June 18th SCR CONNECTions webinar, Karen Vargas answered all these questions and many more.  Did you miss the webinar?  A recording of the session is now available along with a link to presentation materials.

Join us July 16th for the next SCR CONNECTions webinar!  As always the webinars are free and open to all.

NLM Presentations at MLA Recordings Available

Friday, June 6th, 2014

MLA 2014 Annual Conference

Every year at the MLA Annual Meeting, the National Library of Medicine holds a variety of presentations in their exhibit booth to bring users up-to-date on NLM databases and services.  The recordings of the 13 presentations are now available from the NLM Technical Bulletin.   Learn about:

  1. The ACA, Hospital Community Benefit and Needs Assessment: NLM Resources
  2. Beau-TOX: TOXNET Gets a Facelift
  3. MedlinePlus: Usability, Mobile & Responsive Design
  4. Modernizing History: The New (and much improved) IndexCat Interface
  5. My NCBI Update: SciENcv & NIH Public Access
  6. NLM Resources & Electronic Health Records: MedlinePlusConnect, RxNorm & UMLS
  7. NLM Resources Used in Disasters
  8. PubMed Commons
  9. PubMed Health
  10. PubMed Update
  11. RDA One Year Later
  12. Still Scanning After All These Years: New Digital Projects from HMD
  13. Using the ClinicalTrials.gov Results Database

Redesigned TOXNET Database

Friday, May 30th, 2014

New TOXNET interface

The National Library of Medicine (NLM) is introducing a recently redesigned TOXNET interface. The redesign improves the appearance and interactive capabilities and given it a facelift for a more current look and feel.

The new TOXNET features:

  • Improved appearance
  • Intuitive interactive capabilities
  • Improved multi-database search
  • Easy selection of items to save in “My List”
  • More accessible menus and pull-downs
  • Type-ahead Browse
  • Hover-over Help

 

 

HIV/AIDS Community Information Outreach Projects 2014

Thursday, May 29th, 2014

HIV/AIDS Red Ribbon

The National Library of Medicine (NLM) is pleased to announce the solicitation of quotations from organizations and libraries to design and conduct projects that will improve access to HIV/AIDS related health information for patients, the affected community, and their caregivers.

Projects must involve one or more of the following information access categories:

  • Information retrieval;
  • Skills development;
  • Resource development; and/or
  • Equipment Acquisition

Emphasis is placed upon the following types of organizations or arrangements for developing these programs:

  • Community-based organizations (CBOs) or patient advocacy groups currently providing HIV/AIDS related serves to the affected community;
  • Public libraries serving communities in the provision of HIV/AIDS-related information and resources;
  • Health departments or other local, municipal, or state agencies working to improve public health;
  • Faith-based organizations currently providing HIV/AIDS-related services; and/or
  • Multi-type consortia of the above-listed organizations that may be in existence or formed specifically for this project.

Awards are offered for up to $40,000.

Quotations are due to NLM on Friday, July 11, 2014.

The solicitation for the 2014 HIV/AIDS Community Information Outreach Projects is posted on the Federal Business Opportunities Web site.

Full and Open:
https://www.fbo.gov/index?s=opportunity&mode=form&id=72096960b3a499911a1c11cba24f8334&tab=core&_cview=0

Small Businesses can apply to a specific set-aside:
https://www.fbo.gov/index?s=opportunity&mode=form&id=58c7ca4bbb0feb9c38579a930c85cb53&tab=core&_cview=1

Primary Point of Contact:
Elena Leon
Contract Specialist
chaparre@mail.nlm.nih.gov
Phone: 301.435.4394
Fax: 301.402.8169

Secondary Point of Contact :
Robin Hope
Branch Chief, Contracting Officer
Robin.Hope@nih.gov
Phone: 301.496.6546
Fax: 301.402.8169

Please Note: Refer to the Federal Business Opportunities Web site for notices, updates, and modifications to the HIV/AIDS Community Information Outreach Project 2014 RFQ.

Request for Information National Network Of Libraries Of Medicine

Tuesday, May 13th, 2014

NNLM Logo

The National Library of Medicine (NLM) has released a Request for Information (RFI) asking health sciences and public libraries, health professionals, public health workers, community organizations, the general public, and other interested individuals and entities the opportunity to recommend effective approaches on how the National Network of Libraries of Medicine (NN/LM) can provide all U.S. health professionals with equal access to biomedical information and improve the public’s access to health information.

Information Requested:
Recognizing that there have been many changes in information seeking behavior, technology, education, and the health care environment, NLM is seeking input from current and potential user communities to maximize the effectiveness and efficiency of the NN/LM.

Comments can include but are not limited to the following guiding questions:

  • Priorities, Strategies, Partnerships
  • Outreach, Programs Training, Resource Sharing
  • Membership, Network Structure, Service Coordination

All responses must be submitted via email to Justin Fraser and Uyen Phuong by 3 PM June 26, 2014. Please include the Notice number (NIHLM2014157) in the subject line. Response to this RFI is voluntary.

NLM will use the information submitted in response to this RFI for planning purposes and is not obligated to comment or respond to any responder’s submission. However, responses to the RFI may be reflected in futures solicitations.