Archive for the ‘NLM Resources’ Category
ChemIDplus is a dictionary of over 400,000 chemicals (names, synonyms, and structures). It includes links to NLM and other databases and resources, including ones to over 100 federal, state and international agencies. ChemIDplus Lite is designed for simple searching on name or registry number. ChemIDplus Advanced helps users draw their own structures and perform similarity and substructure searches. ChemIDplus records are updated daily. The following new features are now available:
- A new “3D” button on search results pages provides calculated three dimensional structure models for over 300,000 chemicals and 645,000 variations. Users can adjust the rotation speed, the image type (ball and stick, space fill, wireframe), and 3D angle of viewing; dragging the image changes its orientation. Right clicking on the structure box provides other control options such as color, style, measurements, and computation. The open source JSMol program is used for viewing these models. Another feature offers 3D when viewed with Red/Cyan, Red/Green or Red/Blue glasses, allowing for unique visualization of a molecule with depth perception.
- ChemIDplus is now IPhone IOS and Android OS friendly. Buttons collapse to neatly fit the phone screen, and the structures can be displayed.
The National Library of Medicine Training Center (NTC) is offering an online, asynchronous Moodle class called Discovering TOXNET from October 20 – November 14, 2014. Register now to discover TOXNET and other NLM environmental health databases through videos, guided tutorials, and discovery exercises! The class is taught online in thirteen independent modules. Participants work on their own time over a period of four weeks to complete the modules of interest. There is one required module; the remaining are optional. This class is offered for variable MLA Continuing Education credit. Each module will be offered for 0.5 to 2.0 credit hours, for a total of up to 12 hours. Credit will not be awarded for partial completion of a module. Total credit awarded will be based on completed modules with a minimum of 1.0 credit hours.
TOXNET is a web-based system of databases covering hazardous chemicals, environmental health, toxic releases, chemical nomenclature, poisoning, risk assessment and regulations, and occupational safety and health. The independent modules cover TOXLINE, ChemIDplus, TRI, TOXMAP, Hazardous Substances Data Bank (HSDB), IRIS, Haz-Map, LactMed, WISER, CHEMM, REMM, LiverTox, and more.
The modules are:
- Introduction to TOXNET: 0.5 hour (Required)
- TOXLINE: 1.0 hour
- ChemIDplus: 2.0 hours
- Integrated Risk Information System & Risk Assessment: 1.0 hour
- Hazardous Substances Databank: 1.5 hours
- Toxic Release Inventory: 1.0 hour
- TOXMAP: 1.5 hours
- Household Products Database: 0.5 hour
- LactMed: 0.5 hour
- Haz-Map: 0.5 hour
- WISER & CHEMM: 1.0 hour
- REMM: 0.5 hour
- LiverTox: 0.5 hour
Space in the class is limited, so don’t delay registering! For questions, contact the NTC.
The Summer 2014 issue of NIH MedlinePlus the Magazine features information on treating cataracts, understanding rheumatoid arthritis (RA), screening for breast cancer, and The Children’s Inn at NIH turning 25. The cover features Amy Robach, who was diagnosed as the one of 1-in-8 women in America who will be affected by breast cancer in their lifetimes. After receiving the first-ever mammogram on live television, she received a surprising breast cancer diagnosis. She now speaks out in support of others facing the disease. The magazine goes into further detail about breast cancer, looking at detection, diagnosis, screening, staging, and treatment, as well as some relevant National Cancer Institute research.
The magazine also highlights The Children’s Inn at NIH. The Children’s Inn enhances opportunities for groundbreaking medical discoveries by providing a free “place like home” that reduces the burdens of illness through a supportive environment, including therapeutic, educational, and recreational programming. President George H. W. Bush and his wife, Barbara, are serving as honorary chairpersons for the year of celebrations for The Children’s Inn’s 25th Anniversary, which kicked off on June 21, 2014, and will continue throughout the anniversary year of 2015. The Bushes presided over the ribbon cutting ceremony when The Inn became a reality in June 1990.
NIH MedlinePlus the Magazine is the free, trusted consumer guide to the vast array of authoritative online health and medical information at MedlinePlus. Published four times a year, the magazine showcases the National Institutes of Health’s (NIH) latest medical research and healthcare information. NIH MedlinePlus the Magazine is freely available as a print subscription, e-mail alerts, and online.
Community Health Maps Blog is an initiative designed to share information about free and low cost and easy-to-use applications of Geographic Information Systems (GIS) mapping tools. The goal is to help community-based and other types of small organizations collect and visualize information about their communities with an eye towards using these techniques to support planning and decision-making about community health. The tools discussed on the Community Health Maps Blog can support the collection and visualization of health statistics, demographic information, community resources, and events, thereby facilitating a better understanding of community conditions.
The interactive nature of blogging helps Community Health Maps share information about hardware platforms and software applications available to communities as they consider how, or if, they might use GIS. NLM encourages the submission of blog postings by those who use such resources to carry out projects within their communities, as well as those who have identified additional applications that may be of interest for this purpose.
Attention health science librarians in the United States who wish to initiate and/or extend bioinformatics services at your institution! The National Center for Biotechnology Information (NCBI) and the NLM Training Center (NTC) will be offering “A Librarian’s Guide to NCBI” course in 2015. Participants who complete the class will be eligible for Medical Library Association (MLA) Continuing Education credits. The course is free, but travel costs are at the expense of the participant.
There are two parts to the course, and applicants must take both parts:
- Part 1: “Fundamentals in Bioinformatics and Searching” is a six-week, online (asynchronous) pre-course.
- Part 2: A five-day in-person course offered on-site at the National Library of Medicine in Bethesda, Maryland.
- Monday, September 29, 2014 – Watch for a detailed announcement about the course and application process in the NLM Technical Bulletin.
- Monday, November 17, 2014 – Application deadline.
- Monday, December 15, 2014 – Acceptance notifications e-mailed.
- Monday, January 12, 2015 – “Fundamentals in Bioinformatics and Searching” pre-course begins.
- Monday, March 9, 2015 – “A Librarian’s Guide to NCBI” five-day in-person class begins at NLM.
Mark your calendars for this training opportunity!
The Winter 2013 issue of NIH MedlinePlus Salud features timely information on the dangers of skin cancer, how to manage the growing problem of asthma among Hispanics, and tips on taking your medicines safely and on time. The cover features Jessica Alba, whose childhood asthma was so bad that she had to be hospitalized multiple times. Fellow students teased her because the breathing machine she had to use now and then was so loud. That led to a commitment to helping achieve a cleaner environment to help reduce environmental triggers. Other celebrities who have struggled with asthma include Diane Keaton, Sharon Stone, Lindsay Lohan, Jerome Bettis, Pink, and many others.
One of NIH MedlinePlus Salud’s goals is to increase the health literacy among the fast-growing Hispanic population across the U.S. One way to do this is to have electronic editions of each issue — in Spanish and English — that can be read and interacted with on the Internet from any computer, smartphone, and tablet. Additionally, print subscriptions are available at no charge for those who prefer to read a physical magazine.
For more free, reliable, up-to-date health information, visit MedlinePlus and MedlinePlus en español.
The National Library of Medicine’s Journal Donation System makes it possible for libraries to determine whether NLM needs any volumes of the print journals they plan to discard. The system can be used by DOCLINE and non-DOCLINE libraries to offer any title, including titles not owned by NLM. The system can be accessed directly through the web site or by searching “Journal Donation System” on NLM’s home page. In the system, click on “Help” for detailed instructions. For additional assistance, contact NLM at (301) 496-0081 or NLMJournalDonation@mail.nlm.nih.gov. NLM will pay shipping for needed volumes. For donations of pre-1871 journal volumes, contact the NLM History of Medicine Division.
Since the beginning of the online donation system in April 2009, over 10,000 gifts have been added to the NLM collection. With the help of libraries planning to discard journal volumes, NLM can build on the success achieved to date.
The National Library of Medicine Value Set Authority Center (VSAC), in collaboration with the Office of the National Coordinator for Health Information Technology (ONC) and Centers for Medicare & Medicaid Services (CMS), has published the annual update for the 2014 Eligible Professional Clinical Quality Measure (CQM) Value Sets. The update includes revised value sets to address deleted and remapped codes in the latest terminology versions, as well as new codes for addressing CQM logic corrections and clarifications. The Centers for Medicare & Medicaid Services (CMS) update these electronic reporting specifications annually to ensure that the specifications align with current clinical guidelines and terminologies, and that they remain relevant and actionable within the clinical care setting.
The VSAC offers a Downloadable Resource Table, accessible from the Download tab on the VSAC Web page, that provides prepackaged downloads for the most recently updated and released 2014 CQM Value Sets, as well as for previously released versions. Access to the Value Set Authority Center requires a free Unified Medical Language System® Metathesaurus License. NLM also provides the Data Element Catalog that identifies data element names (value set names) required for capture in electronic health record technology certified under the 2014 Edition of the ONC Standards and Certification Criteria. The NLM update of the VSAC coincides with the CMS posting of the official updated 2014 Eligible Professional Clinical Quality Measures.
The following resources are available to help health care providers and vendors navigate the 2014 CQMs:
- NLM: Value Set Authority Center (VSAC) Provides downloadable access to all official versions of vocabulary value sets contained in the 2014 Clinical Quality Measures.
- AHRQ: United States Healthcare Knowledge Database (USHIK) Agency for Healthcare Research and Quality’s Web site with 2014 eCQMs and other health information technology resources. This site provides a number of formats for viewing, downloading, and comparing versions of eCQMs and their value sets.
- CMS: eCQM Library Guidance for understanding and using Eligible Hospital and the Eligible Professional Clinical Quality Measures.
- ONC: Clinical Quality Measure Feedback System ONC encourages the EHR technology developer and user communities to provide feedback regarding the implementation, structure, intent, and data elements pertaining to CQMs.
- Questions? Contact NLM Value Set Authority Center Help.
AIDSinfo, a service of the US Department of Health and Human Services (HHS), recently updated its AIDSinfo (English) and infoSIDA (Spanish) Web sites. They are now automatically optimized for display across all devices, including desktop computers, tablets, and smartphones. Visitors to the AIDSinfo and infoSIDA Web sites will now be able to access all of the content on any device they are using. AIDSinfo offers access to the latest, federally approved HIV/AIDS medical practice guidelines, HIV treatment and prevention clinical trials, and other research information for health care providers, researchers, people affected by HIV/AIDS, and the general public.
NLM decided to create a responsive design Web site, a site that automatically adjusts to any device, because of a shift in the ways that people are accessing the Internet. Between 2010 and 2014, mobile traffic to the AIDSinfo Web site increased tenfold, and almost 90% of health care providers surveyed on the AIDSinfo Web site have Internet access at the point of care, and of those, more than two-thirds use a mobile device when seeing patients. With this redesign, health care providers, researchers, people with HIV/AIDS, their family and friends, and anyone who visits the Web site will now be able to access the HIV/AIDS medical practice guidelines, drug database, fact sheets, clinical trials search, HIV/AIDS glossary, and all of the other features in an easy-to-navigate format no matter what device they are using.
If you have saved the mobile site URLs (http://m.aidsinfo.nih.gov/ and http://m.infosida.nih.gov/) as a Bookmark or Favorite on your tablet or smartphone, you will be automatically redirected to the responsive design Web site. Please send your questions or feedback about the responsive design Web site to: ContactUs@aidsinfo.nih.gov.
Beginning June 2, 2014, the National Library of Medicine will add new and updated citations to PubMed seven days a week. Daily updating is a welcome enhancement to PubMed. Prior to this change, NLM updated PubMed five times a week on Tuesday through Saturday.
Likewise, new MEDLINE/PubMed update files for NLM data licensees will appear on the ftp server daily by noon ET. More than one update file may become available on the same day. The update files are available all hours seven days per week throughout the year.
For more information, visit the NLM Technical Bulletin.