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Archive for the ‘NCBI’ Category

Save the Dates: 2015 “A Librarian’s Guide to NCBI” Course

Attention health science librarians in the United States who wish to initiate and/or extend bioinformatics services at your institution! The National Center for Biotechnology Information (NCBI) and the NLM Training Center (NTC) will be offering “A Librarian’s Guide to NCBI” course in 2015. Participants who complete the class will be eligible for Medical Library Association (MLA) Continuing Education credits. The course is free, but travel costs are at the expense of the participant.

There are two parts to the course, and applicants must take both parts:

  • Part 1: “Fundamentals in Bioinformatics and Searching” is a six-week, online (asynchronous) pre-course.
  • Part 2: A five-day in-person course offered on-site at the National Library of Medicine in Bethesda, Maryland.

Important Dates:

  • Monday, September 29, 2014 – Watch for a detailed announcement about the course and application process in the NLM Technical Bulletin.
  • Monday, November 17, 2014 – Application deadline.
  • Monday, December 15, 2014 – Acceptance notifications e-mailed.
  • Monday, January 12, 2015 – “Fundamentals in Bioinformatics and Searching” pre-course begins.
  • Monday, March 9, 2015 – “A Librarian’s Guide to NCBI” five-day in-person class begins at NLM.

Mark your calendars for this training opportunity!

New NCBI Bookshelf Item: The Art and Politics of Science, a Memoir

Dr. Harold Varmus’ memoir, The Art and Politics of Science, chronicles his path from a graduate student in English literature at Harvard to co-recipient of the Nobel Prize for cellular origin of retroviral oncogenes, to director of the National Institutes of Health, to President and CEO of Memorial Sloan-Kettering Cancer Center. The memoir is now freely available on the NCBI Bookshelf:

The Art and Politics of Science, by Dr. Harold Varmus. There are sections on PubMed: Virtues and Limitations and journal publishing from Chapter 15, Science Publishing and Science Libraries in the Internet Age.

Newly Released Entrez Direct from NCBI!

NCBI has just released Entrez Direct, a new software suite that allows you to use the UNIX command line to directly access NCBI’s data servers, as well as parse and format data to create customized data files. The latest NCBI News story discusses Entrez Direct and gives several examples of how the programs may be used, as well as links to the suite on FTP and documentation. Entrez Direct is available as a simple FTP download and has extensive documentation on the NCBI web site.