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Dragonfly, Winter 2001

Making Sense of Subsets


by Nancy Ottman Press, Consumer Health Network Librarian, NN/LM PNR

The PubMed subset menu in Limits makes it easy to search for a specific subset within the PubMed database. Simply click on the Subsets pull-down menu. Right? Right, with a few exceptions. Those exceptions as well as the "subset rules" are discussed here.

There are three main types of subsets:

1. Journal subsets. These are subsets in which certain journal titles are included -- all articles from those specific titles, sometimes just for specific years. Some of these subsets are very small, like the AIDS journal subset which only includes 40 titles. The titles in any one subset may be subject related (like dentistry) or may be collated for some other reason (like the AIM or Abridged Index Medicine subset). The catch is that there are some journal subsets NOT on the subset pull-down menu. Here's an example of how to do this search: to get the Health Care Administration subset of journals you would include

... AND jsubseth

in your search strategy. Do not use the [sb] field tag.

2. Subject subsets. PubMed has built-in search strategies, hedges, to find articles on a particular subject. These articles might come from any journal. An example is the new CAM or Complementary and Alternative Medicine subset. You could use the Limits pull-down menu or you could search using the subset field tag, as in:

cam [sb]

3. Citation status subsets. These subsets have nothing to do with subjects or journal titles, but rather have to do with the source or status of a citation. PreMEDLINE, soon to be replaced by "MEDLINE in process" is one of the citation status subsets. Once more, these can be searched using the Limits pull-down menu or the search field tag indicator [sb].

As more subsets are added to PubMed, it's sometimes hard to keep them all straight. For example, notice that there are two AIDS subsets, a journal subset and also a subject subset. The following table presents the information by subset name, type of subset, and how to search for it in PubMed.

Characteristics of Subsets in PubMed

Subset Name

Type of Subset

Search in PubMed

Journal

Subject (search strategy)

Citation Status

AIDS (same name is used to refer to two different subsets: AIDS journal subset OR AIDS subject subset)

X
LocatorPlus: search for x (any of these) in special list indicator; ~40 titles

jsubsetx

X

pull-down menu under limits OR aids [sb]

AIM

X
LocatorPlus: search for abridged index medicus (as a phrase) in abstract/index tags; list also at http://www.nlm.nih.gov/bsd/aim.html; ~150 titles; ~120 current titles

pull-down menu under limits OR jsubsetaim

Biotechnology

(indexed only 1990-1998)

X
LocatorPlus: search for b (any of these) in special list indicator; ~20 titles

jsubsetb

Communicative Disorders (indexed only 1977-1997)

X

list of titles not available

jsubsetc

Complementary Medicine

X

pull-down menu under limits OR cam [sb]

Consumer Health Journals

X
LocatorPlus: search for k (any of these) in special list indicator; ~12 titles

jsubsetk

Dental

X
LocatorPlus: search for d (any of these) in special list indicator; ~1000 titles; ~300 current titles

pull-down menu under limits OR jsubsetd

Health Care Administration

X
LocatorPlus: search for h (any of these) in special list indicator; ~800 titles; ~200 current titles

jsubseth

Health Technology Assessment

X
LocatorPlus: search for t (any of these) in special list indicator; ~130 titles; ~90 current titles

jsubsett

Index Medicus

X

LocatorPlus: search for index medicus (as a phrase) in abstract/index tags; ~7000 titles; ~4000 current titles

jsubsetim

MEDLINE

X

pull-down menu under limits OR medline [sb]

MEDLINE in process (was preMedline)

X

pull-down menu under limits OR premedline [sb] to be replaced by in process [sb]

Nursing

X
LocatorPlus: search for n (any of these) in special list indicator; ~700 titles; ~300 current titles

pull-down menu under limits OR jsubsetn

Publisher-supplied

X

pull-down menu under limits OR publisher [sb]

Reproduction and Population (indexed only 1972-1979)

X
LocatorPlus: search for r (any of these) in special list indicator; ~7000 titles

jsubsetr

Toxicology

X

pull-down menu under limits OR tox [sb]

Table by Nancy Press, 2/16/01


Dragonfly, Winter 2001 -- Vol. 32, Number 1 (posted on PNRNews March 14, 2001)
NN/LM | UW Healthlinks | UW Health Sciences Libraries | NLM | Discovery Tools
NN/LM PNR | nnlm@u.washington.edu | Revised: March 13, 2001
URL: http://nnlm.gov/pnr/news/200101/subsets.html