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Archive for the ‘PubMed’ Category

2015 MeSH Now Available in PubMed

Monday, December 15th, 2014

As of December 15, PubMed/MEDLINE citations (including the backlog of citations indexed since November 19 with 2015 MeSH), the MeSH database, and the NLM Catalog were updated to reflect 2015 MeSH.

The MeSH translation tables were also updated on December 15. Now that end-of-year activities are complete, MEDLINE/PubMed may be searched using 2015 MeSH vocabulary, however, don’t be surprised if your search comes up empty. It will take a little bit of time for Indexers to begin to use the new terms.  For example, the term Courage was added to MeSH for 2015, but it has yet to be applied to a citation.

This link will show you the details for all MeSH data changes made for 2015. http://www.nlm.nih.gov/mesh/introduction.html Scroll down to item #4 and look at the list of new descriptors/MeSH headings.

On December 16th, NLM will resume daily MEDLINE updates to PubMed (they’ve been on hold due to year-end-processing).

Has Cheezburger?

Monday, December 8th, 2014

No that’s not a typo. And no we’re not going to talk about cheeseburgers (or cats) today. For those of you who don’t know what I’m talking about, visit here: http://icanhas.cheezburger.com

Now, on to the business at hand. PubMed contains commands to find citations with corrections, erratum, comments and patient summaries. View the 2 minute 32 second video to see where to find the commands and how to use them (Once you view the video below, you’ll see the connection between the title of this blog entry and the commands).

After you press Play, click on the controls below the video to change your view to HD (look for the little gear icon). You can also view the video in full-screen mode.

Are you a Subscriber? NLM Technical Bulletin

Monday, November 24th, 2014

The NLM Technical Bulletin, produced by the National Library of Medicine, is your source for the latest PubMed changes and searching information. You can sign up for email updates or an RSS Feed. Be the first kid on the block to know!

techbulletin

Make Friends with MeSH

Monday, November 10th, 2014

Where do you start your searches? There are many options. Watch this 3 minute video to learn how to build a search from within the MeSH database.

Dates in MeSH

Wednesday, November 5th, 2014

This video answers one of the most common questions we hear about MeSH: what do the dates mean?

Take a look, and if you’d like to learn more, check out the MeSH tutorial from the National Library of Medicine.

 

MEDLINE/PubMed Year-End Processing Activities for 2014

Monday, October 20th, 2014

The National Library of Medicine (NLM) is currently involved in MEDLINE year-end processing (YEP) activities. These include changing the Medical Subject Headings (MeSH) main headings as well as Supplementary Concept Records that standardize names and associated numbers for chemical, protocols, and diseases that are not main headings. The MeSH edits include existing MEDLINE citations to conform with the 2015 version of MeSH, and other global changes.

Important Dates:

November 19, 2014: NLM expects to temporarily suspend the addition of fully-indexed MEDLINE citations to PubMed. Publisher-supplied and in process citations will continue to be added.

Mid-December 2014: PubMed MEDLINE citations, translation tables, and the MeSH database will have been updated to reflect 2015 MeSH.

For details about the impact on searching from November 20 to mid-December, see: Annual MEDLINE/PubMed Year-End Processing (YEP): Impact on Searching During Fall 2014.

For background information on the general kinds of changes made annually, see: Annual MEDLINE/PubMed Year-End Processing (YEP): Background Information.

In Case You Missed It

Wednesday, October 15th, 2014

Our blog is just one way we like to connect with you! We also have Twitter and Facebook accounts. Here are some of our most popular posts from the past few months:

Library Entrance at OHSU

Evidence-Based Education: What works?

Monday, October 13th, 2014

Take a break (22 minutes) and watch this video presentation by Victoria Brazil, a physician and medical educator from Australia. She talks about what educational modalities and interventions are effective in medical education. Spoiler alert: the answer is everything and nothing.

http://www.thepoisonreview.com/2014/10/11/saturday-with-smacc-evidence-based-education-what-works/

Keeping up with the National Library of Medicine

Wednesday, October 8th, 2014

One question we’re often asked in our classes is how to keep up with changes to PubMed and other NLM Resources. There are lots of changes, but there are several resources as well. Whether your interest is PubMed, History of Medicine, disaster medicine, or NCBI databases, you can find a blog, Facebook page, Twitter account, or even Pinterest board to follow. For the full list of ways to connect with NLM, see their social media page.

In addition to the NLM accounts, you can also follow the social media of your National Network of Libraries of Medicine Region or one of the Centers (like us, the National Library of Medicine Training Center).

Finally, we always recommend subscribing to the National Library of Medicine Technical Bulletin. You can be among the first to know about changes to PubMed and other important information that may impact your use of NLM resources. They also have a searchable archive that can be useful for finding when particular changes occurred. For example, you can search for “bolded” to learn that PubMed began making your search terms appear in bold in 2011.

Nuns, Surgeons, and Transplant Recipients

Wednesday, October 1st, 2014

What do nuns, surgeons, and transplant recipients have in common?

No, it’s not the beginning of a joke — they’re all new MeSH terms for 2015!

I mentioned last week that I love exploring the newly released MeSH terms. Here are a few more highlights.

In the information science branch, Common Data ElementsData CurationDatasets as Topic, and Printing, Three-Dimensional have all been added to the vocabulary.

Social NormsSocial SkillsCourage, and Craving have been added to the behavior branch, and I’m glad to see the addition of Military Family as well.

Several forms of elimination and absorption have been added, including Intramuscular Absorption and Lacrimal Elimination.

Palliative MedicineElectronic CigarettesCulturally Competent Care, and Grounded Theory also made it into the MeSH vocabulary this year.

Want to make a suggestion for next year? Send it to NLM!