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Archive for the ‘PubMed’ Category

Create an alert in PubMed. Get Notified when MeSH terms have been applied.

Monday, August 24th, 2015

Watch this short video to learn how to create an alert in PubMed so you can be notified when MeSH terms have been added to an in-process citation.

Use the buttons below the video to turn closed captions off/on or to change the resolution of the video.

SciENcv Updated to Support New NIH Biosketch Format

Monday, August 17th, 2015

In November, NIH announced a new format for biographical sketches (aka biosketches); the new format is required for grant applications submitted for due dates after May 24, 2015. SciENcv, a tool available through PubMed’s My NCBI for creating biosketches, has been updated to reflect the format changes and to help users convert their existing NIH biosketches from the old format to the new.

Differences between the old and new NIH Biosketch formats include:

  1. Maximum length increased from 4 to 5 pages
  2. Rearranged data in the table at the top of the Biosketch
  3. Section A, Personal Statement can now include up to 4 supporting citations
  4. Section C is now called “Contribution to Science” and should be comprised of up to 5 brief descriptions of your most significant contributions to science, each with up to 4 supporting citations. In addition,  you may also provide a URL to a full list of your published work as found in a publicly available digital database such as My Bibliography. This section is the most notable difference in the new format.

old and new biosketch

Read all about the changes herehttp://goo.gl/BoQp4M

Introducing PubMed Labs

Friday, July 31st, 2015

PubMed Labs is a new initiative from NCBI (National Center for Biotechnology Information) designed to create innovative and relevant products by involving the user community from the very beginning. PubMed users are now encouraged (and being solicited) to provide feedback on PubMed directly through the NCBI blog.

A few of the key points of this new initiative:

  • PubMed Labs will feature early versions of new tools, experimental content, and proposed features.
  • The focus of PubMed Labs is on what works in the real world.
  • PubMed Labs is intended to be a forum for conversation.

For more information, read the post on the NCBI Insights blog. The “PubMed Labs” category on the blog will help facilitate conversation, and interested persons can follow the posts via RSS feed.

PubMed Milestone – 25 Millionth Journal Citation Added

Tuesday, June 30th, 2015

You can find the latest number of citations in PubMed by searching with this command: all[sb].

25 million citations in PubMed

Citation Status Tags: The More You Know

Tuesday, June 23rd, 2015

Do you miss viewing the PubMed Citation Status tag while in the Summary View? The Citation Status tag tells us which step in the indexing process a particular citation is in and whether or not we can expect to find MeSH terms applied to the citation, now or in the future.

Click here for a previous post on how to setup a Custom filter using your MyNCBI account for some of the citation statuses.

Here is a list of the different statuses that a citation can have and the search command to use to create a filter.

Here is a short video by NLM on how to use your MyNCBI account to add a right-side filter.

 

PubMed “Save Search” and” Related Citations” Renamed

Monday, June 8th, 2015

You knew them as Save Search, RSS and Related Citations. The names have been changed, but the functionality is the same.

Click here to read about the new “Create Alert” link.

pubmedchanges

 

 Click here to read about the new “Similar Articles” link. 

pubmedchanges2

 

 

PubMed for Trainers Coming to a Town Near You

Monday, June 1st, 2015

The NTC and NLM will be offering PubMed for Trainers 10 times between now and April 30, 2016.

PubMed for Trainers is a 4-part series of classes; 3 online plus 1 in-person class. The class is worth 13 MLA CE credits.

Click here for a complete description of PubMed for Trainers

Boston, MA August 5-25, 2015 (Registration Closed)

New York, NY August 5-27, 2015 (Registration closed)

Chicago, IL September 3-25, 2015 (Waiting List Only)

Seattle, WA October 22-November 10, 2015 

Bethesda, MD October 20-29, 2015

Miami, FL January 7-28, 2016

Bethesda, MD February 2-9, 2016

Davis, CA February 4-25, 2016

Dallas, TX March 3-24, 2016 (Waiting List Only)

St. Louis, MO April 4 – 14, 2016

PubMed for Trainers offers an in-depth, behind the scenes look at PubMed. You will:

  • Fill gaps in general knowledge you might have about MEDLINE and PubMed.
  • Enhance your knowledge of the MEDLINE database
  • Discover what the National Library of Medicine considers good background information.
  • Improve your PubMed search technique.
  • Improve your ability to analyze and implement Medical Subject Headings (MeSH)

Click here to view the complete schedule of classes.

We hope to see you there!!

NTC Tutorials & Recordings Anytime

Wednesday, April 15th, 2015

Did you know that you can view our tutorials and recordings at any time that’s convenient for you? If you have a few extra minutes, check out one of our self-paced tutorials or recorded webinars to learn something new or brush up on one of your most-used resources. Here are a few you might take a look at:

 

PubMed Display Changes: Citation Status Tags

Monday, April 6th, 2015

As of March 26, 2015 PubMed will no longer display the citation status tags while in the Summary Display option. Now, the tags can only be seen while in the Abstract or Abstract (text) options.

If you rely on these tags to quickly scan the status of your results, there is a workaround. You can choose or create filters that will always show on the right side of your results page by using your My NCBI account.

The MEDLINE filter is available in the Filters portlet within your My NCBI account. Once in the Filters portlet, click on Properties and then Subsets. You’ll find MEDLINE in the list.

Here is a short video on how to setup filters in My NCBI:

To create a filter for In Process and As Supplied by Publisher citations, you will need to create two custom filters. When creating the custom filters, use this format to capture In Process citations: inprocess[sb] and use this format to capture As Supplied by Publisher citations: publisher[sb].

Here is a short video about how to create a custom filter.

Click here to view the page in PubMed Help that shows you the search tag format for each type of citation status.

Subject Filter Strategies Updated

Wednesday, March 4th, 2015

PubMed has several Subject Filters that can be used for searching, and each year the filters are reviewed to determine if they need to be updated. This year, the following subject filters have been revised:

  • Cancer
  • Complementary Medicine
  • Dietary Supplements
  • Systematic Reviews
  • Toxicology
  • Veterinary Science

You can find information on all of the filters, including links to the full strategy in the PubMed Resources Guide.  Also, notice that you can apply these filters by adding the subject filter name [sb] to your search. For example, to add the complementary medicine filter to your search, simply add AND cam [sb].