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Archive for the ‘Technology and Libraries’ Category

Searching for Drugs and Chemicals in PubMed (Focus on NLM Resources session)

Sunday, October 19th, 2014

Presenter: Sharon Dennis and Rebeeca Brown, National Library of Medicine Training Center (NTC)

Date / Time: Tuesday, November 4, 2014 / Noon – 1 pm (ET)

Where: https://webmeeting.nih.gov/nlmfocus/

Online / No Registration Required

Summary: During this session, trainers from the National Library of Medicine Training Center (NTC) will help you become familiar with the NLM MeSH vocabulary related to chemicals and drugs, and to get comfortable with searching for drug information in PubMed. They will explain how chemicals, drugs and other substances are described in MeSH, discuss how to search for drugs or chemicals in PubMed, and demonstrate how to search using pharmacological action terms.

Evolution of a Search: The Use of Dynamic Twitter Searches During Superstorm Sandy

Sunday, October 19th, 2014

PLOS: Currents: Disasters, September 26, 2014

This research article, co-authored by National Institutes of Health librarian Alicia Livinski, is an example of collaboration between a library and public health agency developing search strategies to organize and monitor the vast array of information sent out via Twitter during a disaster.

http://currents.plos.org/disasters/article/evolution-of-a-search-the-use-of-dynamic-twitter-searches-during-superstorm-sandy/

Helpful Ebola Resources

Thursday, October 16th, 2014

CDC Taking Active Steps Related to Hospital Preparedness for Ebola Treatment
The Centers for Disease Control and Prevention (CDC) are taking steps to assist hospitals prepare for Ebola. This October 15, 2014 press release outlines the steps they are taking in response to health care workers in Dallas who have contracted Ebola: http://www.cdc.gov/media/releases/2014/fs1014-ebola-investigation-fact-sheet.html

 

Disaster Lit Updates and Recent CDC Webinar Recordings

The Disaster Information Management Research Center (DIMRC) at NLM continues to update documents, guidance tools, webinars, and more to the Disaster Lit Resource Guide for Disaster Medicine and Public Health.

Some people were unable to attend recent webinars, such as the CDC call on preparing for Ebola and the Johns Hopkins symposium webcast. The links to these and other recordings are in Disaster Lit as they become available: http://disasterlit.nlm.nih.gov/search/?searchTerms=ebola+OR+hemorrhagic&search.x=45&search.y=11&search=Search

 

Recording: Ebola Outbreak: Managing Health Information Resources

October 9, 2014

Speaker: Cindy Love, Disaster Information Management Research Center (DIMRC), National Library of Medicine (NLM

The recording of the webinar on managing health information resources for Ebola is now available online, along with the PowerPoint slides. In this webinar, Cindy Love, specialist in public health information management with the NLM, discussed the nature of information flow during an infectious disease outbreak, with a special focus on Ebola-related resources from the NLM: http://disasterinfo.nlm.nih.gov/dimrc/dismeetings.html#previous14

 

Ebola Guidelines Included in Disaster Lit

A recent document from the American Hospital Association suggests “all hospitals and clinics to post … Ebola screening criteria prominently in locations where hospital staff – including intake, triage and clinical staff – can see it” (http://www.aha.org/advocacy-issues/tools-resources/advisory/2014/141002-readiness-adv.pdf).

Be proactive at your institution and provide guidelines in print and electronic form to those working with or preparing to work with Ebola patients. You can find these guidelines gathered in Disaster Lit using the search link below. You can refine by guideline source, year, or author: http://disasterlit.nlm.nih.gov/search/?search=Search&PubTypeID[]=13&searchTerms=%28ebola%20OR%20hemorrhagic%29

Here are examples of searches of Disaster Lit for guidelines by source:

A list of checklists from the CDC, the Office of the Assistant Secretary for Preparedness and Response, and others, is also available in Disaster Lit:

  1. Checklist for Patients Being Evaluated for Ebola Virus Disease (EVD) in the United States

Source: Centers for Disease Control and Prevention (CDC)

Date Published: 10/01/2014

This one-page document is a checklist for patients being evaluated for Ebola virus disease (EVD) in the United States. Topics include arrival to clinical setting/triage, conducting a risk assessment for high-risk or low-risk exposures, use of personal protective equipment, and patient placement and care considerations.

URL: http://www.cdc.gov/vhf/ebola/pdf/checklist-patients-evaluated-us-evd.pdf

Type: Guideline/Assessment Tool

  1. Ebola Preparedness for the U.S. Healthcare System

Source: U.S. Department of Health and Human Services, Office of the Assistant Secretary for Preparedness and Response (ASPR)

Date Published: 09/29/2014

Format: Video or Multimedia

This one-hour webinar discusses a Detailed Hospital Checklist for Ebola Preparedness to highlight activities that all hospitals can take to prepare for the possibility of a patient exposed to Ebola arriving for medical care. The webinar is especially for hospital emergency managers, infection control officers, hospital leadership, and clinical staff. The checklist provides practical and specific suggestions to ensure hospitals are able to detect possible Ebola cases, protect employees, and respond appropriately. The webinar was co-sponsored by the U.S. Department of Health and Human Services Office of the Assistant Secretary for Preparedness and Response, and the Centers for Disease Control and Prevention.

URL:http://www.phe.gov/Preparedness/responders/Pages/ebola-healthcare-webinar.aspx

  1. Checklist for Healthcare Coalitions for Ebola Preparedness

Source: Centers for Disease Control and Prevention (CDC)

Date Published: 09/26/2014

This four-page document is a checklist intended to enhance collective preparedness and response to the Ebola virus disease by highlighting key areas for U.S. healthcare coalitions to review in preparation for a person under investigation (PUI) for Ebola at a coalition member’s facility. The checklist provides practical and specific suggestions to ensure healthcare coalition members are able to detect possible Ebola cases, protect employees, and respond appropriately.

URL:http://www.cdc.gov/vhf/ebola/pdf/coalition-checklist-ebola-preparedness.pdf

  1. Detailed Emergency Medical Services (EMS) Checklist for Ebola Preparedness

Source: Centers for Disease Control and Prevention (CDC)

Date Published: 09/26/2014

This six-page document is a checklist intended to enhance collective preparedness and response to possible Ebola and other infectious disease cases by highlighting key areas for emergency medical services (EMS) personnel to review in preparation for encountering and providing medical care to a person with Ebola. The checklist provides practical and specific suggestions to ensure the agency is able to help its personnel detect possible Ebola cases, protect those personnel, and respond appropriately.

URL:http://www.cdc.gov/vhf/ebola/pdf/ems-checklist-ebola-preparedness.pdf

  1. Template for Public Health Laboratory Risk Assessment for Ebola Virus Disease (EVD) Testing

Source: Association of Public Health Laboratories (APHL)

Date Published: 09/24/2014

This 13-page template is designed to assist laboratories in the development of their risk assessment for Ebola virus disease (EVD). It may not be an all-encompassing plan as each facility will have its own laboratory specific risk assessment procedures. It also includes checklists for chemical safety, emergency preparedness, documentation and training, waste management, engineering controls, and at-risk employees; and a laboratory specimens handling log.

URL:http://www.aphl.org/aphlprograms/preparedness-and-response/Documents/APHL-Template.pdf

Type: Guideline/Assessment Tool

  1. Health Care Facility Preparedness Checklist for Ebola Virus Disease (EVD)

Source: Centers for Disease Control and Prevention (CDC)

Date Published: 09/12/2014

This two-page document is a checklist that highlights some key areas for health care facilities to review in preparation for a person with Ebola virus disease (EVD) arriving for medical care. In this checklist, health care personnel refers to all persons, paid and unpaid, working in health care settings who have the potential for exposure to patients and/or to infectious materials, including body substances, contaminated medical supplies and equipment, contaminated environmental surfaces, or contaminated air.

URL:http://www.cdc.gov/vhf/ebola/pdf/healthcare-facility-checklist-for-ebola.pdf?s_cid=cs_3923

  1. Health Care Provider Preparedness Checklist for Ebola Virus Disease

Source: Centers for Disease Control and Prevention (CDC)

Date Published: 09/12/2014

This two-page document is a checklist that highlights some key areas for health care providers to review in preparation for a person with Ebola virus disease (EVD) arriving for medical care. In this checklist, health care personnel refers to all persons, paid and unpaid, working in health care settings who have the potential for exposure to patients and/or to infectious materials, including blood and body fluids, contaminated medical supplies and equipment, and contaminated environmental surfaces.

URL:http://www.cdc.gov/vhf/ebola/pdf/healthcare-provider-checklist-for-ebola.pdf?s_cid=cs_3923

Type: Guideline/Assessment Tool

  1. Detailed Hospital Checklist for Ebola Preparedness

Source: Centers for Disease Control and Prevention (CDC)

Date Published: 09/05/2014

This six-page checklist, developed by the U.S. Department of Health and Human Services, Centers for Disease Control and Prevention, and Office of the Assistant Secretary for Preparedness and Response, highlights key areas for hospital staff – especially hospital emergency management officers, infection control practitioners, and clinical practitioners – to review in preparation for a person with Ebola virus diseases arriving at a hospital for medical care. The checklist provides practical and specific suggestions to ensure a hospital is able to detect possible Ebola cases, protect employees, and respond appropriately.

URL:http://www.cdc.gov/vhf/ebola/pdf/hospital-checklisk-ebola-preparedness.pdf

Siobhan Champ-Blackwell

DIMRC / NLM

National Library of Medicine Resource Update: Drug Information Portal

Friday, October 10th, 2014

The National Library of Medicine (NLM) Drug Information Portal is a free web resource that provides an informative, user–friendly gateway to current drug information for over 53,000 substances. The Portal links to sources from the NLM, the National Institutes of Health (NIH), and other government agencies such as the U.S. FDA. Current information regarding consumer health, clinical trials, AIDS–related drug information, MeSH pharmacological actions, PubMed biomedical literature, and physical properties and structure is easily retrieved by searching a drug name. A varied selection of focused topics in medicine and drug–related information is also available from displayed subject headings.

The Drug Portal retrieves by the generic or trade name of a drug or its category of usage. Records provide a description of how the drug is used, its chemical structure and nomenclature, and include up to 20 Resource Locators which link to more information in other selected resources. Recent additions to these Locators include clinical experience with drugs in PubMed Health, substances reviewed in NLM’s LiverTox, information from the Dietary Supplement Label Database, and drug images in the Pillbox database. Data in the Drug Information Portal is updated daily, and is also available on mobile devices. More information is available from the Drug Information Portal Fact Sheet.

WISER for iOS Update

Friday, October 10th, 2014

WISER for iOS 3.1.1 is now available.  This new release provides full support for iOS 7 and above, introducing a new look and feel to match the latest iOS release.

To find out “What’s New”: http://wiser.nlm.nih.gov/whats_new_iOS_3_1_1.html

WISER for iOS can be downloaded and installed directly from the Apple App Store: http://itunes.apple.com/us/app/wiser-for-ios/id375185381?mt=8

Coming Soon

Look for these exciting additions in the coming months:

  • WISER for iOS and WISER for Android 4.5, which adds chemical reactivity, triage procedures, and WISER’s full set of radiological tools to these mobile platforms
  • WISER 4.6, which will fully integrate the DOT’s Emergency Response Guidebook substances and update much of WISER’s backend data, including its HSDB (Hazardous Substances Data Bank) substance data

Adding Value to EHRs: Librarians Step Up

Friday, October 10th, 2014

Date: October 29, 2014 – 2:00 PM EDT

Hosted by the HealthIT COI and UConn Health

Description:

“Everybody talks about the weather, but nobody does anything about it.”     ~ Charles Dudley Warner

There is SO much talk about Health IT and EHRs and yet, how many of us can say we’re actively involved?  Attribute this to HIPAA, or politics or a silo mentality at many institutions, librarians are frequently frustrated by a perceived inability to get to the table and contribute.

This webinar features two librarians who ARE involved.  Tune in to hear how one describes ways to become involved and stay in touch with EHRs and hear the experiences of another teaching EPIC’s CADENCE application to employees working at the front desk of her organization.

Register here https://nnlm.gov/ner/training/register.html?schedule_id=3079

Guest speakers include:

  • Dina McKelvy, MLS, AHIP, Library Manager for Automation and Planning at Maine Medical Center Library
  • Mina Davenport, MLS,CT, UCSF Benioff Children’s Hospital Oakland

20 Apps in 40 Minutes: Putting Apps to Use in the Classroom

Friday, October 10th, 2014

Date: Wednesday, October 22, 2014
Time: 3:00 pm EST
Duration: 60 min

Join the Blended Librarians Online Learning Community on Wednesday, October 22 at 3:00 pm EST for a webcast presentation and discussion with Sherri Hope Culver, Associate Professor at Temple University. In this high energy and interactive presentation, a wide range of apps and online activities will be shared that many teachers are using (or could use) in the classroom. The webinar will provide an overview of each app or online activity, show the basics of how to use it, and share ways the app may be integrated into numerous classroom activities and subject areas. The goal of the webinar is one of breadth– not depth. This webinar will send attendees away with a list of at least 20 apps and online activities and tips for how to find the best new apps on an ongoing basis. Join us to learn how our faculty are using apps for learning and how blended librarians can support faculty in finding and using apps.

About Our Presenter:
Sherri Hope Culver is an Associate Professor at Temple University, Department of Media Studies and Production and serves as Director of the Center for Media and Information Literacy. Sherri chairs the Teaching, Learning and Technology Roundtable faculty committee. She is currently serving her third term as President of the National Association for Media Literacy Education. Sherri consults with media companies on strategic management, content development and media literacy with a focus on children’s media. She is co-editor of the UNESCO MILID Yearbook 2014: Media and Information Literacy and Intercultural Dialogue and author of the books, The Television and Video Survival Guide and The Media Career Guide.

This is a free event but we ask that you register in advance.

Webinar attendees will receive a Blended Librarian Online Learning Community badge to document their participation in this learning event.

Explore the archives of past Blended Librarian webcasts at our website.

Audit an Evaluation MOOC

Friday, October 10th, 2014

Have you always been curious about Massive Open Online Courses (MOOCs) and haven’t yet checked them out, or have started a MOOC and not completed it because you found the format confusing or didn’t have the time to complete all the assignments in it?

Evaluating Social Programs is currently being offered by the Massachusetts Institute of Technology (MIT) within one of the easier-to-navigate open access MOOC formats, EdX. The course is now closed for registration for credit, but can still be accessed for free to audit with complete access to the instructional materials, activities, tests and discussions within the MOOC. It is estimated that full participation in each week of the course will take approximately 4 hours, but of course you are welcome to skip around and access the information that is of interest to you. I am currently auditing the MOOC while taking note of new resources and information that is likely to be of interest to you from a health program evaluation perspective this month, and will write a summary blog post in November.

The class description is:

This four and a half-week course on evaluating social programs will provide a thorough understanding of randomized evaluations and pragmatic step-by-step training for conducting one’s own evaluation. Through a combination of lectures and case studies from real randomized evaluations, the course will focus on the benefits and methods of randomization, choosing an appropriate sample size, and common threats and pitfalls to the validity of the experiment. While the course is centered around the why, how and when of Randomized Evaluations, it will also impart insights on the importance of a needs assessment, measuring outcomes effectively, quality control, and monitoring methods that are useful for all kinds of evaluations.

If you are interested in participating in Evaluating Social Programs and have not previously taken an EdX MOOC, I highly recommend checking out the 15 minute self-navigated DemoX which provides a very user-friendly overview of how to make the best use of the features within EdX.

Qualitative Data Visualization

Friday, October 10th, 2014

An innovative and compelling approach to creating qualitative data visualizations with illustrations is provided by Fresh Spectrum. The process begins by taking a long narrative such as a focus group transcription, and chunking it into a few paragraphs per concept with a unique illustration for each one. One option is to use your organization’s existing images or Creative Commons-licensed images for illustrating concepts. The next step for the visualization uses the images with brief captions as an online data dashboard, where visitors can click on the captioned image of interest to them to access the more detailed narrative. One example describes how to do this within a WordPress portfolio blog template, or a simpler strategy of creating HTML anchor links to each individual section within a longer text, which then leads to the longer narrative.

The NN/LM Outreach Evaluation Resource Center (OERC) has more resources available from the Reporting and Visualizing tab of the OERC Tools and Resources for Evaluation Guide.

Send in Your Application to Participate in “A Librarian’s Guide to NCBI” Bioinformatics Course

Friday, October 3rd, 2014

Health science librarians in the U.S. are invited to participate in the next offering of the bioinformatics training course, “A Librarian’s Guide to NCBI,” sponsored by the National Library of Medicine (NLM), the National Center for Biotechnology Information (NCBI), and the National Network of Libraries of Medicine, NLM Training Center (NTC).

The course provides knowledge and skills for librarians interested in helping patrons use online molecular databases and tools from the NCBI. Prior knowledge of molecular biology and genetics is not required. Participating in the Librarian’s Guide course will improve your ability to initiate or extend bioinformatics services at your institution.

Instructors will be NCBI staff and Diane Rein, Ph.D., MLS, Bioinformatics and Molecular Biology Liaison from the Health Science Library, University at Buffalo.

Online Pre-Course and In-Person Course Components
There are two parts to “A Librarian’s Guide to NCBI,” listed below. Applicants must complete both parts. Participants must complete the pre-course with full CE credit (Part 1) in order to advance to attend the 5-day in-person course (Part 2).

Part 1: “Fundamentals in Bioinformatics and Searching,” an online (asynchronous) course,
January 12 – February 13, 2015

The major goal of this part is to provide an introduction to bioinformatics theory and practice in support of developing and implementing library-based bioinformatics products and services. This material is essential for decision-making and implementation of these programs, particularly instructional and reference services. The course encompasses visualizing bioinformatics end-user practice. It places a strong emphasis on hands-on acquisition of NCBI search competencies, and developing a working molecular biology vocabulary through self-paced hands-on exercises.

Part 2: A 5-day in-person course offered on-site at the National Library of Medicine in Bethesda, Maryland, March 9 – 13, 2015.

The in-person course will focus on using the BLAST sequence similarity search and Entrez text search systems to find relevant molecular data. The course will describe the various kinds of molecular data available and explain how these are generated and used in modern biomedical research. The course will be a combination of instruction, demonstration, discussions, and hands-one exercises (both individual and group).

Who can apply?

Applications are open to health science librarians in the United States.

Applicants will be accepted both from libraries currently providing bioinformatics services as well as from those desiring to implement services.

Enrollment is limited 25 participants.

What does it cost?

There is no charge for the classes. Travel and lodging costs for the in-person class are at the expense of the participant.

à à à IMPORTANT NOTE: Interested applicants may want to consider a MAR professional development award to support travel for the in-person training.

Important Application Dates

Application deadline: November 17, 2014

Acceptance notification: On or about December 15, 2014

How to Apply

Please fill out the Application Form at https://www.surveymonkey.com/s/guide_2015_app.

Once you complete the Application Form, you will be directed to download the Supervisor Support Statement (ftp://ftp.ncbi.nih.gov/pub/education/librarian_guide/Forms/Supervisor_Supportv2.pdf). This is to be filled out and signed by your immediate supervisor. This statement describes your current and/or future role in bioinformatics support at your institution and confirms your availability to attend the course if selected.

Provide your current curriculum vitae (CV). Please use the suggested CV model as a guideline for the type of information desired (ftp://ftp.ncbi.nih.gov/pub/education/librarian_guide/Forms/LibGuide_CV_model.pdf).

Course Page
The course page with additional information is at: http://www.ncbi.nlm.nih.gov/education/librarian/

Questions?
Please direct any questions to: ncbi_course@lists.utah.edu

By Janet Zipser
MEDLARS Management Section