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Archive for the ‘Technology and Libraries’ Category

Honoring the Retirement of NLM Director Dr. Donald Lindberg

Monday, March 2nd, 2015

National Library of Medicine Deputy Director Betsy Humphreys has announced a special program and reception to be held on Monday, March 30, on the NIH campus in Bethesda, MD, to celebrate the contributions of NLM Director Donald A.B. Lindberg, MD, on the occasion of his retirement.  The public is invited.  RSVPs are due by Monday, March 16.

Also, anyone is invited to share stories, words of gratitude and humor, photos, or any combination thereof, for a memory book parting gift for Dr. and Mrs. Lindberg.  Submissions should be composed on an 8 ½” x 11” sheet of paper and e-mailed to publicinfo@nlm.nih.gov, or hand delivered or mailed to Mary Miller, NLM Office of Communications and Public Liaison (OCPL), Building 38, Room 2S15F, MSC 3812, Bethesda, MD 20894, by Monday, March 16.

Data Visualization Webinars from Association of Research Libraries

Monday, March 2nd, 2015

Data Visualization Webcasts to Help You Tell Your Library’s Stories

Understanding Gamification

Monday, March 2nd, 2015

Please note a new ALA Library Technology Report, “Understanding Gamification.”  It provides a great overview of this emerging technology trend.  The report can be found at: http://alatechsource.metapress.com/content/q7745w2282u8/?sortorder=asc&v=expanded&Author=Bohyun+Kim

The first chapter is available free at:

HTML :  http://alatechsource.metapress.com/content/g1007777u7k3445m
PDF: http://alatechsource.metapress.com/content/g1007777u7k3445m/fulltext.pdf

Teleconference Today—Interested in Leading the Regional Medical Library Program?

Monday, February 23rd, 2015

The National Library of Medicine (NLM) seeks candidates with experience in program coordination and health information policy for a Supervisory Librarian to lead our Regional Medical Library program.

If you are interested in this position, we strongly encourage you to attend our informational webinar on February 23, 2015 from 3 – 4 pm (ET).

Click here to register

The Head of the National Network Office (NNO) of the National Network of Libraries of Medicine (NN/LM) serves as a national leader in developing collaborations among libraries in the Network.

The NNO Head is responsible for monitoring, evaluating, and advising on all aspects of biomedical information provision, for outreach to groups experiencing health disparities, and for the provision of access to medical information in emergency and disaster situations (national and international).  The Head also advises on public health information policy issues related to programs conducted throughout the Network.

NLM is in the process of transitioning our agreements with the Regional Medical Libraries from a contract funding mechanism to a grant cooperative agreement.  The Head will serve as Chair of the Scientific Steering Committee of the organizations awarded these cooperative agreements.

As a supervisory librarian at the GS-15 level, the position has a salary range of $126,245-$158,700, and reports to the Associate Director for Library Operations, Joyce Backus.

NLM will begin accepting applications for this position in early March.  At that time, we will release a second announcement with a link to the actual application.

We hope that you will consider applying for this exciting leadership opportunity.

If you have any additional questions, please don’t hesitate to ask!

NCBI Webinar: The Next Generation of Access to Sequencing Data

Friday, February 20th, 2015

Next Wednesday, February 25, NCBI staff will present a webinar on the SRA Toolkit, a system for accessing the approximately 3.4 Petabases of next-generation genomic and expressed sequence data housed in the NCBI Sequence Read Archive (SRA). As data sets become larger, mining information and performing comparisons directly from structured databases becomes increasingly necessary. The SRA Toolkit is not only capable of dumping the data out as a fastq or sam file, but also provides direct analysis and comparison from specific genomics regions across hundreds or thousands of samples.

In the webinar, we will show examples of configuration and use of the Toolkit for both public SRA and controlled access data associated with studies in the Database of Genotypes and Phenotypes (dbGaP).

To register for this webinar: https://attendee.gotowebinar.com/register/2847950984085163009

Deadline Extended for Public Comments on Proposals to Enhance Transparency of Clinical Trial Results

Friday, February 20th, 2015

In November, the Department of Health and Human Services (HHS) and the National Institutes of Health (NIH) released for public comment two proposals to increase the transparency of clinical trials via information submitted to ClinicalTrials.gov, a publicly accessible database operated by the National Library of Medicine. One is a Notice of Proposed Rulemaking (NPRM) that describes proposed regulations for registering and submitting summary results of certain clinical trials to ClinicalTrials.gov in compliance with Title VIII of the Food and Drug Administration Amendments Act of 2007 (FDAAA). A major proposed change from current requirements is the expansion of the scope of clinical trials required to submit summary results to include trials of unapproved, unlicensed, and uncleared products. The second proposal is a draft NIH policy that would extend the similar registration and reporting requirements to all clinical trials funded by NIH, regardless of whether they are subject to FDAAA. Both proposals aim to improve public access to information about specified clinical trials, information that is not necessarily available from other public sources.

The public may comment on any aspect of the NPRM or proposed NIH Policy. Written comments on the NPRM should be submitted to docket number NIH-2011-0003. Commenters are asked to indicate the specific section of the NPRM to which each comment refers. Written comments on the proposed NIH Policy should be submitted electronically to the Office of Clinical Research and Bioethics Policy, Office of Science Policy, NIH, via email; mail at 6705 Rockledge Drive, Suite 750, Bethesda, MD 20892; or by fax at 301-496-9839, by March 23, 2015.

PubMed Subject Filter Strategies Updated for 2015

Friday, February 20th, 2015

PubMed subject filter strategies are reviewed each year to determine if modifications are necessary. Modifications may include revisions due to changes in Medical Subject Heading (MeSH) vocabulary or MEDLINE journals, adding or deleting terms, and changing parts of a strategy to optimize retrieval. The following subset strategies were recently revised:

Opportunity to Affect the Future of the National Library of Medicine

Friday, February 13th, 2015

You have a unique opportunity to affect the future of the National Library of Medicine. As Dr. Donald A.B. Lindberg retires after 30 years as director of NLM, Dr. Francis Collins, Director of the National Institutes of Health, has convened a “Working Group to Chart the Course for the NIH National Library of Medicine.” The group’s charge and members: http://www.nih.gov/about/director/02032015_working-group_nlm.htm.

Consider responding to this time-sensitive NIH Request for Information (RFI), soliciting input into the deliberations of the working group of the advisory committee to the NIH Director. This is a very important opportunity to contribute feedback of the value of the National Library of Medicine, and to directly influence the future of this organization.

Your response must be submitted electronically at http://grants.nih.gov/grants/rfi/rfi.cfm?ID=41, and will ONLY be accepted through March 13, 2015.

Please share this information with colleagues and friends who might wish to respond with thoughts about how the NLM, and especially the collections, programs, and resources, have contributed to their research, teaching, education, and professional development.

List of Serials Indexed for Online Users

Friday, February 13th, 2015

The List of Serials Indexed for Online Users (LSIOU), 2015 edition, is now available in XML format. The 2015 edition contains 14,856 serial titles, including titles currently indexed for MEDLINE as well as titles indexed over time which have ceased or changed titles. The titles are listed alphabetically by the journal title abbreviation. Tailored lists of indexed journals may be generated from the NLM Catalog. While the XML version of the LSIOU is a snapshot in time, the results of a search in the NLM Catalog will provide a “real time” list for the LSIOU.

For a “real time” list for the LSIOU, enter reportedmedline in the search box and click “Search.” For a list of only the currently indexed MEDLINE journals, enter currentlyindexed in the search box and click “Search.” Display and sort formats are selected from the results page; click on the Display Settings pull-down menu to choose a display format (for example, the Journal display) and an appropriate sort (for example, Title or Title Abbreviation). To save the entire list as one document, click on the “Send to” pull-down menu, with “File” as the destination, choose a format and sort order, and then click “Create File.” Click “Save” in the File Download pop-up box. Provide your directory location and desired file name.

Additional information about journals indexed for MEDLINE can be found via the links from the MEDLINE/PubMed Resources web page. This page includes Journals Recently Accepted by NLM for Inclusion in MEDLINE, a list of titles selected by the Literature Selection Technical Review Committee (LSTRC) that meets three times per year in February, June, and October. Results from those meetings appear online about six weeks after each meeting, both on the web page and in the NLM Catalog. For additional details about searching the NLM Catalog, visit NLM Catalog Quick Tours and Searching for Journals in the NLM Catalog.

AHRQ and NASA Release Their Public Access Plans

Friday, February 13th, 2015

Both AHRQ and NASA have released their public access plans (response to the “OSTP Memo”). Both intend to use PMC as a repository for publications written by investigators/researchers they fund.

Links to their plans are below. The HHS plan (which will include NIH) should be released very soon.

AHRQ: http://www.ahrq.gov/funding/policies/publicaccess/index.html

NASA: http://science.nasa.gov/media/medialibrary/2014/12/05/NASA_Plan_for_increasing_access_to_results_of_federally_funded_research.pdf